HCSGD entry for PRDM12

1. General information

Official gene symbolPRDM12
Entrez ID59335
Gene full namePR domain containing 12
Other gene symbolsPFM9
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0003677DNA bindingIEAmolecular_function
GO:0005634NucleusIEAcellular_component
GO:0006351Transcription, DNA-templatedIEAbiological_process
GO:0006355Regulation of transcription, DNA-templatedIEAbiological_process
GO:0008168Methyltransferase activityIEAmolecular_function
GO:0022008NeurogenesisIEAbiological_process
GO:0046872Metal ion bindingIEAmolecular_function
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.36343443260.89534168910.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0659099254
GSE13712_SHEARUp0.0535430441
GSE13712_STATICDown-0.3105667783
GSE19018Up0.0745226600
GSE19899_A1Down-0.0245521403
GSE19899_A2Down-0.0018225722
PubMed_21979375_A1Down-0.1943093700
PubMed_21979375_A2Up0.1222024605
GSE35957Up0.3642342546
GSE36640Up0.0292503098
GSE54402Up0.1227125219
GSE9593Up0.0648929629
GSE43922Up0.1196246963
GSE24585Up0.0901918278
GSE37065Up0.0987796020
GSE28863_A1Down-0.0126477412
GSE28863_A2Up0.0536929387
GSE28863_A3Up0.3264166636
GSE28863_A4Up0.1045656686
GSE48662Up0.0313862717

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.