HCSGD entry for RARRES1


1. General information

Official gene symbolRARRES1
Entrez ID5918
Gene full nameretinoic acid receptor responder (tazarotene induced) 1
Other gene symbolsTIG1
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0008285Negative regulation of cell proliferationIEAbiological_process
GO:0016021Integral component of membraneIEAcellular_component
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.99765377460.00018650510.99999024730.0245860000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.6081616358
GSE13712_SHEARDown-0.0174745275
GSE13712_STATICDown-0.8734722827
GSE19018Down-1.2659675833
GSE19899_A1Down-0.5319168591
GSE19899_A2Down-2.2461879095
PubMed_21979375_A1Down-0.7200663072
PubMed_21979375_A2Down-1.0797979241
GSE35957Down-2.3635985972
GSE36640Down-0.6524546967
GSE54402Down-2.1744419618
GSE9593Down-3.6852873105
GSE43922Down-0.1968014045
GSE24585Down-0.0753201996
GSE37065Down-0.1901117290
GSE28863_A1Up0.0792694805
GSE28863_A2Down-0.0016493319
GSE28863_A3Up0.0615105132
GSE28863_A4Down-0.0347363981
GSE48662Down-0.7319043629

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Name

Drug

Accession number

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: 25 abstracts the gene occurs.


PubMed ID of the article

Sentenece the gene occurs

26611489In the present study, we have identified 16 senescence-associated genes by differential proteomic analysis of the normal human diploid fibroblast cell line, TIG-1, and focused on ATP6V0A2
21562774Establishment of human induced pluripotent stem cell lines from normal fibroblast TIG-1
21562774TIG-1 is a human fibroblast strain established from fetal lung and has been used extensively in studies of cellular senescence, and numerous data were accumulated at the molecular level
21562774Using the method, we introduced four reprogramming genes to TIG-1 fibroblasts and succeeded in isolating colonies that had embryonic stem cell (ESC)-like morphologies
21562774Thus, we succeeded in establishing iPSC clones from TIG-1
19279193In the present study, we clarified that transforming growth factor beta (TGF-beta) induces cellular senescence in human normal diploid cells, TIG-1, and identified protein kinase Cs (PKCs) as downstream mediators of TGF-beta-induced cellular senescence
18957176The anti-aging potential of Kangen-karyu extract was investigated using the mechanisms of the cellular aging model of stress-induced premature senescence (SIPS) in TIG-1 human fibroblasts
18520066We confirmed that 8-OHdG expression in TIG-1 human fibroblasts was increased by treatment with 300 microM H2O2 for 2 h
21432074The effects of WSP on the glutathione system were examined in PDL 20 (early passage) and PDL 50 (late passage) human lung fibroblasts (TIG-1)
17519288TIG-1, WI-38 and IMR-90 cells) BAF localization depended on the age of the cell, localizing primarily in the nucleus of >90% of young proliferating cells but only 20-25% of aged senescent cells
16804028However, interestingly, whereas an overexpression of mortalin extended in vitro life span of normal fibroblasts (TIG-1), overexpression of HSP60 was neutral
16546133We characterized the effects of in vitro cellular aging on constituents of lipid rafts in human diploid fibroblasts, TIG-1
14567995USA 98 (2001) 4926), we have investigated the effect of in vitro replicative aging of human diploid fibroblasts, TIG-1, on the distribution of plasma membrane cholesterol
108683465% of the maximum life span) human fibroblasts (TIG-1)
9925749Colony formation after transfection with the cyclin D1 expression vector was repressed in NIH-3T3, TIG-1, CHO-K1, and HeLa cells, compared with those with mock and cyclin E expression vectors
8569279When human fibroblast, TIG-1, was growth-stimulated with fetal bovine serum, the induction level of cell cycle-dependent genes was generally much lower in senescent cells than in young counterparts
8569279Four clones of SV40-transformed TIG-1 expressed cyclin D1 at moderate levels during their extended proliferative lifespan
7542356Normal human diploid TIG-1 fibroblasts underwent replicative senescence around 64-68 population doubling levels (PDL) by the irreversible serum-unresponsive G1-growth arrest
8469027We examined the effects of population doubling levels on collagen gel contraction by human lung fibroblasts (TIG-1)
1614223The migration of human fetal lung fibroblasts (TIG-1 and TIG-3) decreased only very slightly with increasing passage, whereas the migration of human fetal skin fibroblasts (TIG-3S) declined gradually: the difference in cell migratory ability between early and late passages was significant (P less than 0
1722008The electrophoretic mobility of 13 human diploid cell strains, TIG-1, TIG-2, TIG-3, TIG-7, WI-38, IMR-90, MRC-5, MRC-9, TIG-1H, TIG-1L, TIG-2M, TIG-2B, and TIG-3S, which were established from different tissues of human embryos, was studied at different passages
1756776Six human lung diploid cell strains established for the study of in vitro cellular aging (TIG-1, TIG-7, WI-38, IMR-90, MRC-5, MRC-9, and HeLa cells as a control) were studied by cellulose acetate membrane electrophoresis for allozymic differences at 18 enzyme loci
1756776Changes in the allozyme genetic signatures were not observed throughout the life span of TIG-1 and MRC-9 cells
2434812Events blocked in prereplicative phase in senescent human diploid cells, TIG-1, following serum stimulation
2434812When senescent human diploid cells, TIG-1, were stimulated with serum at the end of their proliferative life span, such biochemical events as uptakes of 2-deoxyglucose and uridine, and expression of c-myc, were enhanced
3821186Failure in S6 protein phosphorylation by serum stimulation of senescent human diploid fibroblasts, TIG-1
3821186When quiescent young or senescent human diploid cells, TIG-1, were metabolically labeled with 32Pi and stimulated with 10% fetal bovine serum, the phosphorylation of ribosomal S6 protein was enhanced in young cells but not in senescent cells while that of some other proteins were increased in both cells
6333569Responses of human diploid cells, TIG-1, were examined with respect to their ability to initiate DNA synthesis under the influence of various growth factors and their combinations
6301860Senescent human diploid fibroblasts, TIG-1, had labelling indices of about 0
7160447Ganglioside changes during cell aging in human diploid fibroblast TIG-1
7160447Gangliosides of human diploid fibroblast, TIG-1, derived from fetal lung were analyzed during cell aging
7421300Human diploid fibroblasts, TIG-1, were serially subcultivated at low inoculation densities thus maintaining the cultures in log phase throughout their in vitro lifespan
7389832A new human diploid cell strain, TIG-1, for the research on cellular aging
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