HCSGD entry for PCTP
1. General information
| Official gene symbol | PCTP |
|---|---|
| Entrez ID | 58488 |
| Gene full name | phosphatidylcholine transfer protein |
| Other gene symbols | PC-TP STARD2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005829 | Cytosol | NAS TAS | cellular_component |
| GO:0006812 | Cation transport | IDA TAS | biological_process |
| GO:0006869 | Lipid transport | NAS | biological_process |
| GO:0008203 | Cholesterol metabolic process | IEA | biological_process |
| GO:0008289 | Lipid binding | IEA | molecular_function |
| GO:0008525 | Phosphatidylcholine transporter activity | IDA TAS | molecular_function |
| GO:0015695 | Organic cation transport | IDA TAS | biological_process |
| GO:0015697 | Quaternary ammonium group transport | IDA TAS | biological_process |
| GO:0015914 | Phospholipid transport | IDA | biological_process |
| GO:0031210 | Phosphatidylcholine binding | IDA | molecular_function |
| GO:0034220 | Ion transmembrane transport | IDA TAS | biological_process |
| GO:0055085 | Transmembrane transport | IDA TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0264350785 | 0.9511868090 | 0.3794719260 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2214297376 |
| GSE13712_SHEAR | Up | 0.4699453876 |
| GSE13712_STATIC | Up | 0.3791825344 |
| GSE19018 | Up | 0.1948113149 |
| GSE19899_A1 | Up | 0.3364830478 |
| GSE19899_A2 | Up | 0.7088488596 |
| PubMed_21979375_A1 | Up | 0.3959476721 |
| PubMed_21979375_A2 | Up | 1.7708649492 |
| GSE35957 | Down | -0.4005239249 |
| GSE36640 | Down | -0.3746988465 |
| GSE54402 | Up | 0.2537515849 |
| GSE9593 | Down | -0.2634809961 |
| GSE43922 | Up | 0.4979948384 |
| GSE24585 | Up | 0.4582840355 |
| GSE37065 | Up | 0.0952065743 |
| GSE28863_A1 | Up | 0.0235912899 |
| GSE28863_A2 | Up | 0.0507837478 |
| GSE28863_A3 | Down | -0.2647544193 |
| GSE28863_A4 | Up | 0.1277094187 |
| GSE48662 | Down | -0.2246147017 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Name | Drug | Accession number |
|---|---|---|
| Palmitoyl-Linoleoyl Phosphatidylcholine | DB02306 | EXPT01000 |
| Di-Linoleoyl-3-Sn-Phosphatidylcholine | DB04372 | EXPT01218 |
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-98-5p | MIMAT0000096 | MIRT027775 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-32-5p | MIMAT0000090 | MIRT028326 | Sequencing | Functional MTI (Weak) | 20371350 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
