HCSGD entry for BBS2

1. General information

Official gene symbolBBS2
Entrez ID583
Gene full nameBardet-Biedl syndrome 2
Other gene symbolsBBS
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0001103RNA polymerase II repressing transcription factor bindingIPImolecular_function
GO:0005515Protein bindingIPImolecular_function
GO:0005737CytoplasmIEAcellular_component
GO:0007288Sperm axoneme assemblyIEA ISSbiological_process
GO:0007601Visual perceptionIEAbiological_process
GO:0008104Protein localizationISSbiological_process
GO:0010629Negative regulation of gene expressionIEAbiological_process
GO:0014824Artery smooth muscle contractionIEAbiological_process
GO:0021756Striatum developmentIEA ISSbiological_process
GO:0021766Hippocampus developmentIEA ISSbiological_process
GO:0021987Cerebral cortex developmentIEA ISSbiological_process
GO:0030534Adult behaviorIEA ISSbiological_process
GO:0031514Motile ciliumIDA IEAcellular_component
GO:0032402Melanosome transportISSbiological_process
GO:0033365Protein localization to organelleIEA ISSbiological_process
GO:0034464BBSomeIDA IEAcellular_component
GO:0036064Ciliary basal bodyIDAcellular_component
GO:0038108Negative regulation of appetite by leptin-mediated signaling pathwayIEA ISSbiological_process
GO:0040015Negative regulation of multicellular organism growthIEA ISSbiological_process
GO:0040018Positive regulation of multicellular organism growthIEAbiological_process
GO:0042311VasodilationIEAbiological_process
GO:0043001Golgi to plasma membrane protein transportIMPbiological_process
GO:0045444Fat cell differentiationIEA ISSbiological_process
GO:0045494Photoreceptor cell maintenanceIEA ISSbiological_process
GO:0048854Brain morphogenesisIEA ISSbiological_process
GO:0051216Cartilage developmentIEAbiological_process
GO:0060170Ciliary membraneIEAcellular_component
GO:0060271Cilium morphogenesisISSbiological_process
GO:0060296Regulation of cilium beat frequency involved in ciliary motilityIEA ISSbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.00510702480.93547756160.18669722221.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.1079730934
GSE13712_SHEARDown-0.0849299217
GSE13712_STATICUp0.5357970151
GSE19018Up1.3464482007
GSE19899_A1Up0.6823167316
GSE19899_A2Up1.3157016199
PubMed_21979375_A1Up0.0374951467
PubMed_21979375_A2Up0.9972656763
GSE35957Up0.0679917855
GSE36640Up0.5352911363
GSE54402Up0.7206816378
GSE9593Up0.5660292364
GSE43922Up0.2677207961
GSE24585Up0.5804847286
GSE37065Down-0.0531024480
GSE28863_A1Down-0.0485283397
GSE28863_A2Up0.1705556078
GSE28863_A3Down-0.7338945534
GSE28863_A4Up0.0098508364
GSE48662Down-0.2708818443

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.