HCSGD entry for ABCD4
1. General information
| Official gene symbol | ABCD4 |
|---|---|
| Entrez ID | 5826 |
| Gene full name | ATP-binding cassette, sub-family D (ALD), member 4 |
| Other gene symbols | ABC41 EST352188 MAHCJ P70R P79R PMP69 PXMP1L |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005524 | ATP binding | IEA NAS | molecular_function |
| GO:0005777 | Peroxisome | IDA | cellular_component |
| GO:0005778 | Peroxisomal membrane | IEA | cellular_component |
| GO:0005789 | Endoplasmic reticulum membrane | IEA | cellular_component |
| GO:0006200 | ATP catabolic process | NAS | biological_process |
| GO:0006810 | Transport | IEA | biological_process |
| GO:0009235 | Cobalamin metabolic process | IMP | biological_process |
| GO:0016020 | Membrane | IEA | cellular_component |
| GO:0016021 | Integral component of membrane | IEA NAS | cellular_component |
| GO:0016887 | ATPase activity | IEA | molecular_function |
| GO:0042626 | ATPase activity, coupled to transmembrane movement of substances | IEA NAS | molecular_function |
| GO:0043190 | ATP-binding cassette (ABC) transporter complex | NAS | cellular_component |
| GO:0055085 | Transmembrane transport | NAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5466553322 | 0.8277653471 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1811325742 |
| GSE13712_SHEAR | Down | -0.2727515626 |
| GSE13712_STATIC | Down | -0.3298102806 |
| GSE19018 | Down | -0.0688076033 |
| GSE19899_A1 | Down | -0.0436594986 |
| GSE19899_A2 | Up | 0.2372243550 |
| PubMed_21979375_A1 | Up | 0.1838873604 |
| PubMed_21979375_A2 | Up | 0.0226492793 |
| GSE35957 | Up | 0.0795933970 |
| GSE36640 | Up | 0.3056963209 |
| GSE54402 | Down | -0.0818024401 |
| GSE9593 | Up | 0.0164053906 |
| GSE43922 | Down | -0.0061343524 |
| GSE24585 | Up | 0.3650702342 |
| GSE37065 | Down | -0.0230308647 |
| GSE28863_A1 | Up | 0.1436709373 |
| GSE28863_A2 | Up | 0.1224820690 |
| GSE28863_A3 | Up | 0.0812137722 |
| GSE28863_A4 | Down | -0.0276268158 |
| GSE48662 | Up | 0.0223075962 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-26b-5p | MIMAT0000083 | MIRT030267 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-484 | MIMAT0002174 | MIRT042098 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
