HCSGD entry for PTPRS

1. General information

Official gene symbolPTPRS
Entrez ID5802
Gene full nameprotein tyrosine phosphatase, receptor type, S
Other gene symbolsPTPSIGMA
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0004725Protein tyrosine phosphatase activityIEAmolecular_function
GO:0005001Transmembrane receptor protein tyrosine phosphatase activityTASmolecular_function
GO:0005515Protein bindingIPImolecular_function
GO:0005887Integral component of plasma membraneTAScellular_component
GO:0007155Cell adhesionIEAbiological_process
GO:0007165Signal transductionTASbiological_process
GO:0021510Spinal cord developmentIEAbiological_process
GO:0021549Cerebellum developmentIEAbiological_process
GO:0021766Hippocampus developmentIEAbiological_process
GO:0021987Cerebral cortex developmentIEAbiological_process
GO:0022038Corpus callosum developmentIEAbiological_process
GO:0030198Extracellular matrix organizationTASbiological_process
GO:0035335Peptidyl-tyrosine dephosphorylationTASbiological_process
Entries Per Page
Displaying Page of

4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.33498815770.23309944910.99999024730.9301714069

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0769033013
GSE13712_SHEARDown-0.5938781391
GSE13712_STATICDown-0.4313623536
GSE19018Up0.1667911227
GSE19899_A1Down-0.2009285193
GSE19899_A2Up0.0789120457
PubMed_21979375_A1Down-0.2742824086
PubMed_21979375_A2Down-0.2445588345
GSE35957Down-0.0952713118
GSE36640Up0.1030746610
GSE54402Down-0.0737515365
GSE9593Up0.0291815840
GSE43922Down-0.0680364209
GSE24585Down-0.0499780509
GSE37065Down-0.2981381967
GSE28863_A1Up1.5936157170
GSE28863_A2Up1.0478657073
GSE28863_A3Up0.1096480153
GSE28863_A4Down-0.0707810230
GSE48662Up0.0138686405

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Name

Drug

Accession number

Alendronic acidDB00630 APRD00561

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-20a-5pMIMAT0000075MIRT050574CLASHFunctional MTI (Weak)23622248
Entries Per Page
Displaying Page of
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.