HCSGD entry for GATAD1
1. General information
| Official gene symbol | GATAD1 |
|---|---|
| Entrez ID | 57798 |
| Gene full name | GATA zinc finger domain containing 1 |
| Other gene symbols | CMD2B ODAG RG083M05.2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003700 | Sequence-specific DNA binding transcription factor activity | IEA | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
| GO:0043565 | Sequence-specific DNA binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1944113104 | 0.8245103378 | 0.8540877003 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.3168831699 |
| GSE13712_SHEAR | Up | 0.2474311297 |
| GSE13712_STATIC | Down | -0.0075820306 |
| GSE19018 | Down | -0.0274334575 |
| GSE19899_A1 | Up | 0.0258790928 |
| GSE19899_A2 | Up | 0.2940094087 |
| PubMed_21979375_A1 | Up | 0.1716140989 |
| PubMed_21979375_A2 | Up | 0.3425731951 |
| GSE35957 | Down | -0.3308855611 |
| GSE36640 | Up | 0.3167813065 |
| GSE54402 | Down | -0.0782340176 |
| GSE9593 | Up | 0.3385028733 |
| GSE43922 | Up | 0.1446084908 |
| GSE24585 | Down | -0.0367455076 |
| GSE37065 | Down | -0.0675948422 |
| GSE28863_A1 | Up | 0.2280859831 |
| GSE28863_A2 | Up | 0.5218515367 |
| GSE28863_A3 | Down | -0.2831210591 |
| GSE28863_A4 | Down | -0.2764300499 |
| GSE48662 | Down | -0.1873929566 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-375 | MIMAT0000728 | MIRT019748 | Microarray | Functional MTI (Weak) | 20215506 |
| hsa-miR-215-5p | MIMAT0000272 | MIRT024438 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026211 | Microarray | Functional MTI (Weak) | 19074876 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
