HCSGD entry for DDX55
1. General information
| Official gene symbol | DDX55 |
|---|---|
| Entrez ID | 57696 |
| Gene full name | DEAD (Asp-Glu-Ala-Asp) box polypeptide 55 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0003723 | RNA binding | IEA | molecular_function |
| GO:0005524 | ATP binding | IEA | molecular_function |
| GO:0008026 | ATP-dependent helicase activity | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0342052962 | 0.7568000760 | 0.4247283962 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.4004159483 |
| GSE13712_SHEAR | Up | 0.7655203440 |
| GSE13712_STATIC | Up | 0.4774963469 |
| GSE19018 | Down | -0.3226203260 |
| GSE19899_A1 | Up | 0.2312834035 |
| GSE19899_A2 | Up | 0.7173252473 |
| PubMed_21979375_A1 | Up | 0.4851357411 |
| PubMed_21979375_A2 | Up | 1.0674701912 |
| GSE35957 | Down | -0.8219493906 |
| GSE36640 | Down | -0.5850969016 |
| GSE54402 | Up | 0.3563012192 |
| GSE9593 | Down | -0.6084868364 |
| GSE43922 | Up | 0.4656025405 |
| GSE24585 | Down | -0.2890929124 |
| GSE37065 | Up | 0.0621682180 |
| GSE28863_A1 | Up | 0.0847498448 |
| GSE28863_A2 | Up | 0.1991012992 |
| GSE28863_A3 | Up | 0.1962819736 |
| GSE28863_A4 | Up | 0.1128956706 |
| GSE48662 | Down | -0.0887736313 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-455-3p | MIMAT0004784 | MIRT037908 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-615-3p | MIMAT0003283 | MIRT040465 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
