HCSGD entry for LRRC4C

1. General information

Official gene symbolLRRC4C
Entrez ID57689
Gene full nameleucine rich repeat containing 4C
Other gene symbolsNGL-1 NGL1
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005515Protein bindingIPImolecular_function
GO:0016020MembraneIDAcellular_component
GO:0016021Integral component of membraneIEA NAScellular_component
GO:0030054Cell junctionIEAcellular_component
GO:0045211Postsynaptic membraneIEAcellular_component
GO:0050770Regulation of axonogenesisIDA IEAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.51015043880.60145886170.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.1088749595
GSE13712_SHEARDown-0.0345756134
GSE13712_STATICDown-0.1696814614
GSE19018Up0.2658526686
GSE19899_A1Up0.1498321389
GSE19899_A2Up0.0347694161
PubMed_21979375_A1Up0.2188286570
PubMed_21979375_A2Up0.1406732098
GSE35957Up0.0336067580
GSE36640Up0.1152131885
GSE54402Up0.1066036519
GSE9593Up0.0134847802
GSE43922Up0.2087907825
GSE24585Down-0.3759598611
GSE37065Down-0.0268093462
GSE28863_A1Down-0.2037492014
GSE28863_A2Down-0.0792886919
GSE28863_A3Up0.1814219244
GSE28863_A4Down-0.0789919391
GSE48662Down-0.2209182180

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.