HCSGD entry for ZSWIM6
1. General information
| Official gene symbol | ZSWIM6 |
|---|---|
| Entrez ID | 57688 |
| Gene full name | zinc finger, SWIM-type containing 6 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
| GO:0048812 | Neuron projection morphogenesis | IEA | biological_process |
| GO:2001222 | Regulation of neuron migration | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0301530109 | 0.5662441245 | 0.4022990877 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.3656412096 |
| GSE13712_SHEAR | Up | 0.1819558846 |
| GSE13712_STATIC | Up | 0.1828248734 |
| GSE19018 | Up | 0.2453055017 |
| GSE19899_A1 | Up | 0.6633488222 |
| GSE19899_A2 | Up | 0.4871077315 |
| PubMed_21979375_A1 | Up | 1.3942285394 |
| PubMed_21979375_A2 | Up | 1.3248362616 |
| GSE35957 | Down | -0.5095501816 |
| GSE36640 | Up | 0.3529479671 |
| GSE54402 | Up | 0.3122313831 |
| GSE9593 | Down | -0.1853148047 |
| GSE43922 | Up | 0.2311908519 |
| GSE24585 | Up | 0.5796376840 |
| GSE37065 | Up | 0.1677302694 |
| GSE28863_A1 | Down | -0.0222462592 |
| GSE28863_A2 | Down | -0.0914460568 |
| GSE28863_A3 | Down | -0.8083383338 |
| GSE28863_A4 | Down | -0.2643349504 |
| GSE48662 | Down | -0.2463648837 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-374b-5p | MIMAT0004955 | MIRT016083 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-502-3p | MIMAT0004775 | MIRT037981 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-324-3p | MIMAT0000762 | MIRT042841 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-18a-5p | MIMAT0000072 | MIRT050654 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
