HCSGD entry for COL20A1

1. General information

Official gene symbolCOL20A1
Entrez ID57642
Gene full namecollagen, type XX, alpha 1
Other gene symbolsbA261N11.4
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005576Extracellular regionTAScellular_component
GO:0005581CollagenIEAcellular_component
GO:0005615Extracellular spaceIEAcellular_component
GO:0005788Endoplasmic reticulum lumenTAScellular_component
GO:0030198Extracellular matrix organizationTASbiological_process
GO:0031012Extracellular matrixTAScellular_component
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.49495670760.92648241710.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0745357551
GSE13712_SHEARUp0.1124003095
GSE13712_STATICUp0.1619920979
GSE19018Up0.0300580868
GSE19899_A1Down-0.0257037411
GSE19899_A2Up0.0840620205
PubMed_21979375_A1Up0.0205177982
PubMed_21979375_A2Up0.0221601031
GSE35957Up0.1844394502
GSE36640Up0.0651078544
GSE54402Up0.0382063322
GSE9593Down-0.1584081635
GSE43922Up0.0513468139
GSE24585Down-0.0003652230
GSE37065Down-0.0986835018
GSE28863_A1Down-0.0987572958
GSE28863_A2Up0.0033108122
GSE28863_A3Up0.4209169850
GSE28863_A4Up0.1190322609
GSE48662Up0.0659381039

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.