HCSGD entry for EP400
1. General information
| Official gene symbol | EP400 |
|---|---|
| Entrez ID | 57634 |
| Gene full name | E1A binding protein p400 |
| Other gene symbols | CAGH32 P400 TNRC12 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0003682 | Chromatin binding | IEA | molecular_function |
| GO:0004386 | Helicase activity | IEA | molecular_function |
| GO:0005524 | ATP binding | IEA | molecular_function |
| GO:0016607 | Nuclear speck | ISS | cellular_component |
| GO:0035267 | NuA4 histone acetyltransferase complex | IDA | cellular_component |
| GO:0043967 | Histone H4 acetylation | IDA | biological_process |
| GO:0043968 | Histone H2A acetylation | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8998006953 | 0.4558819270 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0941901067 |
| GSE13712_SHEAR | Down | -0.0009560461 |
| GSE13712_STATIC | Up | 0.0486200630 |
| GSE19018 | Down | -0.0456381348 |
| GSE19899_A1 | Down | -0.0451950818 |
| GSE19899_A2 | Down | -0.1749879622 |
| PubMed_21979375_A1 | Down | -0.2468432895 |
| PubMed_21979375_A2 | Up | 0.0086900898 |
| GSE35957 | Down | -0.0075827475 |
| GSE36640 | Down | -0.4791643567 |
| GSE54402 | Up | 0.1760456695 |
| GSE9593 | Up | 0.1240229877 |
| GSE43922 | Up | 0.0209761978 |
| GSE24585 | Up | 0.0031373038 |
| GSE37065 | Down | -0.1529235104 |
| GSE28863_A1 | Up | 0.1204902382 |
| GSE28863_A2 | Up | 0.0108093113 |
| GSE28863_A3 | Up | 0.2451883258 |
| GSE28863_A4 | Up | 0.0081634359 |
| GSE48662 | Down | -0.3409174258 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-122-5p | MIMAT0000421 | MIRT023367 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-615-3p | MIMAT0003283 | MIRT040435 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-340-3p | MIMAT0000750 | MIRT043858 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-320a | MIMAT0000510 | MIRT044668 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7i-5p | MIMAT0000415 | MIRT046550 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
