HCSGD entry for LRRN1
1. General information
| Official gene symbol | LRRN1 |
|---|---|
| Entrez ID | 57633 |
| Gene full name | leucine rich repeat neuronal 1 |
| Other gene symbols | FIGLER3 NLRR-1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8834169446 | 0.0122543482 | 0.9999902473 | 0.2183796209 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2674919826 |
| GSE13712_SHEAR | Up | 0.0235517192 |
| GSE13712_STATIC | Up | 0.0166063809 |
| GSE19018 | Down | -2.0428681044 |
| GSE19899_A1 | Down | -0.1049946150 |
| GSE19899_A2 | Down | -0.1934002232 |
| PubMed_21979375_A1 | Down | -0.2864008848 |
| PubMed_21979375_A2 | Down | -0.3421025717 |
| GSE35957 | Down | -1.8486172414 |
| GSE36640 | Down | -0.2869419643 |
| GSE54402 | Down | -0.7745931695 |
| GSE9593 | Up | 0.0969814555 |
| GSE43922 | Down | -0.1131042501 |
| GSE24585 | Down | -0.0376716268 |
| GSE37065 | Down | -1.1256803578 |
| GSE28863_A1 | Down | -0.0782893293 |
| GSE28863_A2 | Up | 0.1497035137 |
| GSE28863_A3 | Up | 0.4609423826 |
| GSE28863_A4 | Down | -0.0797589036 |
| GSE48662 | Up | 0.0533501743 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT019163 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT023145 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-30a-5p | MIMAT0000087 | MIRT049961 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
