HCSGD entry for SLAIN2
1. General information
| Official gene symbol | SLAIN2 |
|---|---|
| Entrez ID | 57606 |
| Gene full name | SLAIN motif family, member 2 |
| Other gene symbols | KIAA1458 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0005813 | Centrosome | IDA | cellular_component |
| GO:0007020 | Microtubule nucleation | IMP | biological_process |
| GO:0015630 | Microtubule cytoskeleton | IDA | cellular_component |
| GO:0031116 | Positive regulation of microtubule polymerization | IMP | biological_process |
| GO:0031122 | Cytoplasmic microtubule organization | IMP | biological_process |
| GO:0035371 | Microtubule plus-end | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7577391930 | 0.4638253904 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0409845260 |
| GSE13712_SHEAR | Down | -0.0580034390 |
| GSE13712_STATIC | Up | 0.2036204147 |
| GSE19018 | Down | -0.0400761255 |
| GSE19899_A1 | Down | -0.0391744011 |
| GSE19899_A2 | Up | 0.2073553052 |
| PubMed_21979375_A1 | Up | 0.4959008378 |
| PubMed_21979375_A2 | Down | -0.0005301065 |
| GSE35957 | Down | -0.0177005148 |
| GSE36640 | Down | -0.0654904136 |
| GSE54402 | Up | 0.2853466793 |
| GSE9593 | Down | -0.0127806483 |
| GSE43922 | Up | 0.0792107054 |
| GSE24585 | Down | -0.0004176978 |
| GSE37065 | Up | 0.0282583021 |
| GSE28863_A1 | Down | -0.3787166715 |
| GSE28863_A2 | Down | -0.2189662400 |
| GSE28863_A3 | Down | -0.0470571495 |
| GSE28863_A4 | Down | -0.2766783197 |
| GSE48662 | Down | -0.2159253345 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-21-5p | MIMAT0000076 | MIRT030692 | Microarray | Functional MTI (Weak) | 18591254 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
