HCSGD entry for PITPNM2
1. General information
| Official gene symbol | PITPNM2 |
|---|---|
| Entrez ID | 57605 |
| Gene full name | phosphatidylinositol transfer protein, membrane-associated 2 |
| Other gene symbols | NIR-3 NIR3 RDGB2 RDGBA2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005509 | Calcium ion binding | NAS | molecular_function |
| GO:0005622 | Intracellular | IEA | cellular_component |
| GO:0006810 | Transport | IEA | biological_process |
| GO:0008152 | Metabolic process | NAS | biological_process |
| GO:0008289 | Lipid binding | IEA | molecular_function |
| GO:0012505 | Endomembrane system | IEA | cellular_component |
| GO:0016021 | Integral component of membrane | NAS | cellular_component |
| GO:0043231 | Intracellular membrane-bounded organelle | IDA | cellular_component |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5643557920 | 0.5239157669 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0481443451 |
| GSE13712_SHEAR | Up | 1.0068796518 |
| GSE13712_STATIC | Up | 0.2356976664 |
| GSE19018 | Down | -0.0214962198 |
| GSE19899_A1 | Up | 0.0113754919 |
| GSE19899_A2 | Down | -0.0562901329 |
| PubMed_21979375_A1 | Down | -0.3668580724 |
| PubMed_21979375_A2 | Up | 0.0428392776 |
| GSE35957 | Down | -0.1024870040 |
| GSE36640 | Up | 0.2057454070 |
| GSE54402 | Down | -0.2037269671 |
| GSE9593 | Down | -0.0590249109 |
| GSE43922 | Up | 0.0486209986 |
| GSE24585 | Down | -0.4622976706 |
| GSE37065 | Down | -0.0503033745 |
| GSE28863_A1 | Up | 0.2065930123 |
| GSE28863_A2 | Up | 0.1756148154 |
| GSE28863_A3 | Up | 0.0691260489 |
| GSE28863_A4 | Down | -0.1054161102 |
| GSE48662 | Up | 0.0367097857 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018089 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-296-3p | MIMAT0004679 | MIRT038447 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-324-3p | MIMAT0000762 | MIRT042927 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
