HCSGD entry for WDR48
1. General information
| Official gene symbol | WDR48 |
|---|---|
| Entrez ID | 57599 |
| Gene full name | WD repeat domain 48 |
| Other gene symbols | P80 UAF1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005764 | Lysosome | IEA | cellular_component |
| GO:0016032 | Viral process | IEA | biological_process |
| GO:0016579 | Protein deubiquitination | IDA | biological_process |
| GO:0043231 | Intracellular membrane-bounded organelle | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2761521599 | 0.9368979636 | 0.9727785064 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0941101744 |
| GSE13712_SHEAR | Down | -0.0201882768 |
| GSE13712_STATIC | Down | -0.2684068762 |
| GSE19018 | Up | 0.3473494428 |
| GSE19899_A1 | Down | -0.0109638682 |
| GSE19899_A2 | Up | 0.1633116524 |
| PubMed_21979375_A1 | Up | 0.4306021577 |
| PubMed_21979375_A2 | Up | 0.4787814080 |
| GSE35957 | Up | 0.1368443080 |
| GSE36640 | Up | 0.0760615474 |
| GSE54402 | Up | 0.0026561160 |
| GSE9593 | Up | 0.1095449769 |
| GSE43922 | Up | 0.0156651856 |
| GSE24585 | Down | -0.0524544091 |
| GSE37065 | Up | 0.0680496702 |
| GSE28863_A1 | - | - |
| GSE28863_A2 | - | - |
| GSE28863_A3 | - | - |
| GSE28863_A4 | - | - |
| GSE48662 | Up | 0.2294852381 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-99b-5p | MIMAT0000689 | MIRT044190 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7e-5p | MIMAT0000066 | MIRT051598 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
