HCSGD entry for PDZD4
1. General information
| Official gene symbol | PDZD4 |
|---|---|
| Entrez ID | 57595 |
| Gene full name | PDZ domain containing 4 |
| Other gene symbols | LU1 PDZK4 PDZRN4L |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005938 | Cell cortex | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6798193230 | 0.5491742335 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0729144769 |
| GSE13712_SHEAR | Up | 0.1325387523 |
| GSE13712_STATIC | Down | -0.3121411974 |
| GSE19018 | Up | 0.0216863328 |
| GSE19899_A1 | Down | -0.0116151589 |
| GSE19899_A2 | Down | -0.0199087158 |
| PubMed_21979375_A1 | Down | -0.1208119385 |
| PubMed_21979375_A2 | Down | -0.0156637427 |
| GSE35957 | Up | 0.0705834733 |
| GSE36640 | Up | 0.2218425242 |
| GSE54402 | Up | 0.0429024772 |
| GSE9593 | Up | 0.0514677000 |
| GSE43922 | Down | -0.1465823716 |
| GSE24585 | Up | 0.0029999660 |
| GSE37065 | Up | 0.0392611581 |
| GSE28863_A1 | Down | -0.2613503622 |
| GSE28863_A2 | Down | -0.0864311770 |
| GSE28863_A3 | Up | 0.3338851075 |
| GSE28863_A4 | Up | 0.1490886449 |
| GSE48662 | Down | -0.0819135697 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018281 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
