HCSGD entry for PCDH10
1. General information
| Official gene symbol | PCDH10 |
|---|---|
| Entrez ID | 57575 |
| Gene full name | protocadherin 10 |
| Other gene symbols | OL-PCDH PCDH19 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005509 | Calcium ion binding | IEA | molecular_function |
| GO:0005886 | Plasma membrane | IEA | cellular_component |
| GO:0007156 | Homophilic cell adhesion | IEA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1842821093 | 0.0069918658 | 0.8393302301 | 0.1669990018 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -1.8377933254 |
| GSE13712_SHEAR | Down | -1.5727449154 |
| GSE13712_STATIC | Down | -2.8575163989 |
| GSE19018 | Down | -0.2287619903 |
| GSE19899_A1 | Up | 0.0731034762 |
| GSE19899_A2 | Down | -0.1067792554 |
| PubMed_21979375_A1 | Up | 0.1262610254 |
| PubMed_21979375_A2 | Down | -0.2058339767 |
| GSE35957 | Up | 2.2766996542 |
| GSE36640 | Down | -0.1121461822 |
| GSE54402 | Up | 0.1223724548 |
| GSE9593 | Up | 0.0214104120 |
| GSE43922 | Up | 0.0538527505 |
| GSE24585 | Up | 0.2556282912 |
| GSE37065 | Down | -0.3394141866 |
| GSE28863_A1 | Down | -0.7599688507 |
| GSE28863_A2 | Up | 1.8892107915 |
| GSE28863_A3 | Down | -0.3985500965 |
| GSE28863_A4 | Down | -0.1711016540 |
| GSE48662 | Down | -0.1852295768 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-186-5p | MIMAT0000456 | MIRT045051 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
