HCSGD entry for TXNDC16
1. General information
| Official gene symbol | TXNDC16 |
|---|---|
| Entrez ID | 57544 |
| Gene full name | thioredoxin domain containing 16 |
| Other gene symbols | ERp90 KIAA1344 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005576 | Extracellular region | IEA | cellular_component |
| GO:0045454 | Cell redox homeostasis | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9215539759 | 0.0011883249 | 0.9999902473 | 0.0652170833 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.3521270268 |
| GSE13712_SHEAR | Down | -1.5590362748 |
| GSE13712_STATIC | Down | -1.1210451128 |
| GSE19018 | Up | 0.0111986925 |
| GSE19899_A1 | Down | -0.3537219922 |
| GSE19899_A2 | Down | -2.9325605672 |
| PubMed_21979375_A1 | Down | -1.3347754774 |
| PubMed_21979375_A2 | Down | -1.7736303850 |
| GSE35957 | Up | 0.0585455152 |
| GSE36640 | Down | -1.1375448788 |
| GSE54402 | Down | -0.8248618396 |
| GSE9593 | Down | -0.0890387278 |
| GSE43922 | Down | -0.6482685922 |
| GSE24585 | Up | 0.4823032925 |
| GSE37065 | Down | -0.0859979453 |
| GSE28863_A1 | Up | 0.0189802024 |
| GSE28863_A2 | Up | 1.0246521266 |
| GSE28863_A3 | Down | -0.3836157288 |
| GSE28863_A4 | Down | -0.0160211371 |
| GSE48662 | Down | -0.4021512204 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-29c-3p | MIMAT0000681 | MIRT020383 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-10b-5p | MIMAT0000254 | MIRT047403 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
