HCSGD entry for NYNRIN
1. General information
| Official gene symbol | NYNRIN |
|---|---|
| Entrez ID | 57523 |
| Gene full name | NYN domain and retroviral integrase containing |
| Other gene symbols | CGIN1 KIAA1305 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003674 | Molecular_function | ND | molecular_function |
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0005575 | Cellular_component | ND | cellular_component |
| GO:0008150 | Biological_process | ND | biological_process |
| GO:0015074 | DNA integration | IEA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8402541507 | 0.0103222560 | 0.9999902473 | 0.2004076527 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0887293491 |
| GSE13712_SHEAR | Down | -1.5118321668 |
| GSE13712_STATIC | Down | -0.2757607095 |
| GSE19018 | Down | -0.2007693656 |
| GSE19899_A1 | Down | -0.2005739260 |
| GSE19899_A2 | Down | -1.3635212963 |
| PubMed_21979375_A1 | Down | -1.4416981993 |
| PubMed_21979375_A2 | Down | -0.3476108081 |
| GSE35957 | Up | 0.0228979897 |
| GSE36640 | Down | -0.5705349994 |
| GSE54402 | Down | -0.9680421708 |
| GSE9593 | Down | -0.6211192489 |
| GSE43922 | Down | -0.7426888425 |
| GSE24585 | Up | 0.3144692394 |
| GSE37065 | Up | 0.1553123965 |
| GSE28863_A1 | Up | 0.1240846098 |
| GSE28863_A2 | Up | 0.2877118872 |
| GSE28863_A3 | Up | 0.0861556918 |
| GSE28863_A4 | Up | 0.2658733774 |
| GSE48662 | Up | 0.2570679619 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-484 | MIMAT0002174 | MIRT042292 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
