HCSGD entry for ARID1B
1. General information
Official gene symbol | ARID1B |
---|---|
Entrez ID | 57492 |
Gene full name | AT rich interactive domain 1B (SWI1-like) |
Other gene symbols | 6A3-5 BAF250B BRIGHT DAN15 ELD/OSA1 MRD12 OSA2 P250R |
Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network

This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
---|---|---|---|
GO:0003677 | DNA binding | IEA | molecular_function |
GO:0003713 | Transcription coactivator activity | NAS | molecular_function |
GO:0005515 | Protein binding | IPI | molecular_function |
GO:0005634 | Nucleus | IDA IEA | cellular_component |
GO:0005730 | Nucleolus | IDA | cellular_component |
GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
GO:0007399 | Nervous system development | IEA | biological_process |
GO:0016514 | SWI/SNF complex | IDA | cellular_component |
GO:0043231 | Intracellular membrane-bounded organelle | IDA | cellular_component |
GO:0048096 | Chromatin-mediated maintenance of transcription | NAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
p-value up | p-value down | FDR up | FDR down |
---|---|---|---|
0.9187641579 | 0.3968259945 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
Data source | Up or down | Log fold change |
---|---|---|
GSE11954 | Down | -0.1743184437 |
GSE13712_SHEAR | Down | -0.0970336124 |
GSE13712_STATIC | Down | -0.0615751786 |
GSE19018 | Up | 0.0306400274 |
GSE19899_A1 | Down | -0.0431193069 |
GSE19899_A2 | Down | -0.2831218826 |
PubMed_21979375_A1 | Up | 0.0109578000 |
PubMed_21979375_A2 | Down | -0.0309488251 |
GSE35957 | Down | -0.2495193409 |
GSE36640 | Down | -0.3231980366 |
GSE54402 | Up | 0.0662755545 |
GSE9593 | Down | -0.0756350123 |
GSE43922 | Up | 0.0384587594 |
GSE24585 | Down | -0.1376382602 |
GSE37065 | Up | 0.0224301729 |
GSE28863_A1 | Up | 0.2835121315 |
GSE28863_A2 | Up | 0.1600599362 |
GSE28863_A3 | Down | -0.0932166322 |
GSE28863_A4 | Down | -0.1509362037 |
GSE48662 | Up | 0.3263393392 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
---|---|---|---|---|---|
hsa-miR-92b-3p | MIMAT0003218 | MIRT040618 | CLASH | Functional MTI (Weak) | 23622248 |
hsa-miR-324-5p | MIMAT0000761 | MIRT043253 | CLASH | Functional MTI (Weak) | 23622248 |
hsa-miR-92a-3p | MIMAT0000092 | MIRT049438 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: 1 abstracts the gene occurs.
PubMed ID of the article | Sentenece the gene occurs |
---|---|
23354547 | In this study, we investigated the functional roles of the H3K4 demethylase, jumonji, AT rich interactive domain 1B (JARID1B), an epigenetic factor required for the continuous cell growth of melanomas, in CRC |
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