HCSGD entry for ARID1B


1. General information

Official gene symbolARID1B
Entrez ID57492
Gene full nameAT rich interactive domain 1B (SWI1-like)
Other gene symbols6A3-5 BAF250B BRIGHT DAN15 ELD/OSA1 MRD12 OSA2 P250R
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0003677DNA bindingIEAmolecular_function
GO:0003713Transcription coactivator activityNASmolecular_function
GO:0005515Protein bindingIPImolecular_function
GO:0005634NucleusIDA IEAcellular_component
GO:0005730NucleolusIDAcellular_component
GO:0006351Transcription, DNA-templatedIEAbiological_process
GO:0007399Nervous system developmentIEAbiological_process
GO:0016514SWI/SNF complexIDAcellular_component
GO:0043231Intracellular membrane-bounded organelleIDAcellular_component
GO:0048096Chromatin-mediated maintenance of transcriptionNASbiological_process
Entries Per Page
Displaying Page of

4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.91876415790.39682599450.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.1743184437
GSE13712_SHEARDown-0.0970336124
GSE13712_STATICDown-0.0615751786
GSE19018Up0.0306400274
GSE19899_A1Down-0.0431193069
GSE19899_A2Down-0.2831218826
PubMed_21979375_A1Up0.0109578000
PubMed_21979375_A2Down-0.0309488251
GSE35957Down-0.2495193409
GSE36640Down-0.3231980366
GSE54402Up0.0662755545
GSE9593Down-0.0756350123
GSE43922Up0.0384587594
GSE24585Down-0.1376382602
GSE37065Up0.0224301729
GSE28863_A1Up0.2835121315
GSE28863_A2Up0.1600599362
GSE28863_A3Down-0.0932166322
GSE28863_A4Down-0.1509362037
GSE48662Up0.3263393392

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-92b-3pMIMAT0003218MIRT040618CLASHFunctional MTI (Weak)23622248
hsa-miR-324-5pMIMAT0000761MIRT043253CLASHFunctional MTI (Weak)23622248
hsa-miR-92a-3pMIMAT0000092MIRT049438CLASHFunctional MTI (Weak)23622248
Entries Per Page
Displaying Page of
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: 1 abstracts the gene occurs.


PubMed ID of the article

Sentenece the gene occurs

23354547In this study, we investigated the functional roles of the H3K4 demethylase, jumonji, AT rich interactive domain 1B (JARID1B), an epigenetic factor required for the continuous cell growth of melanomas, in CRC
Entries Per Page
Displaying Page of