HCSGD entry for AMIGO1
1. General information
| Official gene symbol | AMIGO1 |
|---|---|
| Entrez ID | 57463 |
| Gene full name | adhesion molecule with Ig-like domain 1 |
| Other gene symbols | AMIGO AMIGO-1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005886 | Plasma membrane | IEA | cellular_component |
| GO:0007156 | Homophilic cell adhesion | ISS | biological_process |
| GO:0007157 | Heterophilic cell-cell adhesion | ISS | biological_process |
| GO:0007409 | Axonogenesis | IEA | biological_process |
| GO:0007413 | Axonal fasciculation | ISS | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0030424 | Axon | IEA | cellular_component |
| GO:0042552 | Myelination | ISS | biological_process |
| GO:0050772 | Positive regulation of axonogenesis | ISS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2008519813 | 0.2742967858 | 0.8646273411 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0750110573 |
| GSE13712_SHEAR | Down | -0.5823186950 |
| GSE13712_STATIC | Down | -0.3913951935 |
| GSE19018 | Up | 0.0473725917 |
| GSE19899_A1 | Down | -0.0818675235 |
| GSE19899_A2 | Down | -0.2153829851 |
| PubMed_21979375_A1 | Down | -0.6783802670 |
| PubMed_21979375_A2 | Down | -0.1142593182 |
| GSE35957 | Up | 0.4081620238 |
| GSE36640 | Up | 2.9348033511 |
| GSE54402 | Down | -0.5873353897 |
| GSE9593 | Up | 0.0365272403 |
| GSE43922 | Down | -0.0259063399 |
| GSE24585 | Down | -0.0853592340 |
| GSE37065 | Up | 0.0417556252 |
| GSE28863_A1 | Up | 0.1197820829 |
| GSE28863_A2 | Up | 0.4181755646 |
| GSE28863_A3 | Up | 0.1412165868 |
| GSE28863_A4 | Up | 0.0642974257 |
| GSE48662 | Up | 0.7700222426 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-92b-3p | MIMAT0003218 | MIRT040529 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
