HCSGD entry for RCN3
1. General information
| Official gene symbol | RCN3 |
|---|---|
| Entrez ID | 57333 |
| Gene full name | reticulocalbin 3, EF-hand calcium binding domain |
| Other gene symbols | RLP49 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005509 | Calcium ion binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005788 | Endoplasmic reticulum lumen | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0494118651 | 0.3670652825 | 0.4882649813 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0242914370 |
| GSE13712_SHEAR | Up | 1.6876693721 |
| GSE13712_STATIC | Up | 0.8112048178 |
| GSE19018 | Up | 1.0329457325 |
| GSE19899_A1 | Up | 0.2014478010 |
| GSE19899_A2 | Up | 0.2112762893 |
| PubMed_21979375_A1 | Up | 0.6939799446 |
| PubMed_21979375_A2 | Down | -0.3140564706 |
| GSE35957 | Down | -0.6021975108 |
| GSE36640 | Down | -0.9637786954 |
| GSE54402 | Up | 0.2300201474 |
| GSE9593 | Up | 0.3807796842 |
| GSE43922 | Up | 0.0032973757 |
| GSE24585 | Up | 0.0156392505 |
| GSE37065 | Down | -0.1309072827 |
| GSE28863_A1 | Down | -0.0304916691 |
| GSE28863_A2 | Down | -0.2811645051 |
| GSE28863_A3 | Down | -0.3354353901 |
| GSE28863_A4 | Up | 0.0114704227 |
| GSE48662 | Up | 0.3507573642 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049606 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
