HCSGD entry for SLC4A10
1. General information
| Official gene symbol | SLC4A10 |
|---|---|
| Entrez ID | 57282 |
| Gene full name | solute carrier family 4, sodium bicarbonate transporter, member 10 |
| Other gene symbols | NBCn2 NCBE |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005452 | Inorganic anion exchanger activity | IEA | molecular_function |
| GO:0005886 | Plasma membrane | TAS | cellular_component |
| GO:0006811 | Ion transport | TAS | biological_process |
| GO:0006814 | Sodium ion transport | IEA | biological_process |
| GO:0006821 | Chloride transport | NAS | biological_process |
| GO:0006885 | Regulation of pH | IEA | biological_process |
| GO:0015293 | Symporter activity | IEA | molecular_function |
| GO:0015701 | Bicarbonate transport | NAS TAS | biological_process |
| GO:0016021 | Integral component of membrane | IEA NAS | cellular_component |
| GO:0016323 | Basolateral plasma membrane | IEA | cellular_component |
| GO:0055085 | Transmembrane transport | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9113197637 | 0.5090526994 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0248922631 |
| GSE13712_SHEAR | Down | -0.1481490273 |
| GSE13712_STATIC | Down | -0.1446744437 |
| GSE19018 | Down | -0.1510440712 |
| GSE19899_A1 | Down | -0.1713672538 |
| GSE19899_A2 | Up | 0.0274243311 |
| PubMed_21979375_A1 | Down | -0.0503599853 |
| PubMed_21979375_A2 | Down | -0.3295970737 |
| GSE35957 | Up | 0.0550759723 |
| GSE36640 | Up | 0.0082704800 |
| GSE54402 | Up | 0.1108443684 |
| GSE9593 | Down | -0.0047323991 |
| GSE43922 | Up | 0.0993880571 |
| GSE24585 | Down | -0.0648417312 |
| GSE37065 | Down | -0.0193036838 |
| GSE28863_A1 | Down | -0.0563002428 |
| GSE28863_A2 | Up | 0.0939505642 |
| GSE28863_A3 | Up | 0.1193218504 |
| GSE28863_A4 | Up | 0.0042134837 |
| GSE48662 | Down | -0.0174817854 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-30a-5p | MIMAT0000087 | MIRT005129 | pSILAC//Proteomics;Other | Functional MTI (Weak) | 18668040 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
