HCSGD entry for SMAGP

1. General information

Official gene symbolSMAGP
Entrez ID57228
Gene full namesmall cell adhesion glycoprotein
Other gene symbolshSMAGP
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005634NucleusIDAcellular_component
GO:0005730NucleolusIDAcellular_component
GO:0005886Plasma membraneIDAcellular_component
GO:0016021Integral component of membraneIEAcellular_component
GO:0030054Cell junctionIDAcellular_component
GO:0030659Cytoplasmic vesicle membraneIEAcellular_component
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.00246465940.29528402040.13458983401.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up1.1520669898
GSE13712_SHEARUp0.1744500559
GSE13712_STATICUp0.2845735730
GSE19018Down-0.4973753348
GSE19899_A1Up1.6492873772
GSE19899_A2Up1.8932077887
PubMed_21979375_A1Up2.2463445371
PubMed_21979375_A2Up0.4999027814
GSE35957Down-0.6412837423
GSE36640Down-0.4255400947
GSE54402Up1.5056635268
GSE9593Up0.2874470779
GSE43922Up0.5633828304
GSE24585Up0.4051064626
GSE37065Down-0.2343204908
GSE28863_A1Down-0.5825444256
GSE28863_A2Down-0.2385826327
GSE28863_A3Down-0.2406064564
GSE28863_A4Up0.3033769825
GSE48662Down-0.4223423966

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.