HCSGD entry for SLC39A10
1. General information
| Official gene symbol | SLC39A10 |
|---|---|
| Entrez ID | 57181 |
| Gene full name | solute carrier family 39 (zinc transporter), member 10 |
| Other gene symbols | LZT-Hs2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0006829 | Zinc ion transport | IEA | biological_process |
| GO:0016020 | Membrane | IEA | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0046873 | Metal ion transmembrane transporter activity | IEA | molecular_function |
| GO:0055085 | Transmembrane transport | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4089785798 | 0.0101459595 | 0.9999902473 | 0.1998890719 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.9488056575 |
| GSE13712_SHEAR | Down | -0.1794317438 |
| GSE13712_STATIC | Down | -0.0089163015 |
| GSE19018 | Up | 1.0891543766 |
| GSE19899_A1 | Down | -0.9985299586 |
| GSE19899_A2 | Down | -0.4896160281 |
| PubMed_21979375_A1 | Up | 0.2246094194 |
| PubMed_21979375_A2 | Up | 0.6685862736 |
| GSE35957 | Up | 0.3882607999 |
| GSE36640 | Down | -0.0924332222 |
| GSE54402 | Down | -1.0788947214 |
| GSE9593 | Down | -0.8027803340 |
| GSE43922 | Up | 0.1696170226 |
| GSE24585 | Down | -0.9055115288 |
| GSE37065 | Down | -0.6788133164 |
| GSE28863_A1 | Down | -0.1149649825 |
| GSE28863_A2 | Up | 0.3041939128 |
| GSE28863_A3 | Down | -0.4232010965 |
| GSE28863_A4 | Up | 0.1409286621 |
| GSE48662 | Down | -0.6537384391 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-155-5p | MIMAT0000646 | MIRT005099 | Microarray | Functional MTI (Weak) | 19193853 |
| hsa-miR-186-5p | MIMAT0000456 | MIRT021091 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-140-3p | MIMAT0004597 | MIRT021679 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-103a-3p | MIMAT0000101 | MIRT027001 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT031516 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-324-5p | MIMAT0000761 | MIRT043081 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
