HCSGD entry for TULP4
1. General information
| Official gene symbol | TULP4 |
|---|---|
| Entrez ID | 56995 |
| Gene full name | tubby like protein 4 |
| Other gene symbols | TUSP |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003700 | Sequence-specific DNA binding transcription factor activity | NAS | molecular_function |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0006355 | Regulation of transcription, DNA-templated | NAS | biological_process |
| GO:0007584 | Response to nutrient | TAS | biological_process |
| GO:0016567 | Protein ubiquitination | IEA | biological_process |
| GO:0035556 | Intracellular signal transduction | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2750548649 | 0.5988926940 | 0.9710422422 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0183131660 |
| GSE13712_SHEAR | Down | -0.2797972000 |
| GSE13712_STATIC | Up | 0.0059761118 |
| GSE19018 | Down | -0.1743183158 |
| GSE19899_A1 | Up | 0.0806890810 |
| GSE19899_A2 | Down | -0.0624514123 |
| PubMed_21979375_A1 | Down | -0.1884582955 |
| PubMed_21979375_A2 | Up | 0.1677378215 |
| GSE35957 | Down | -0.0953521767 |
| GSE36640 | Up | 0.4892051707 |
| GSE54402 | Up | 0.3901916063 |
| GSE9593 | Up | 0.3284092526 |
| GSE43922 | Up | 0.0190602045 |
| GSE24585 | Up | 0.0149073653 |
| GSE37065 | Down | -0.1140921345 |
| GSE28863_A1 | Up | 0.4893964897 |
| GSE28863_A2 | Up | 0.6535805847 |
| GSE28863_A3 | Down | -0.1384555235 |
| GSE28863_A4 | Down | -0.2992924090 |
| GSE48662 | Up | 0.0648424898 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017211 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-186-5p | MIMAT0000456 | MIRT021109 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-32-5p | MIMAT0000090 | MIRT028278 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-484 | MIMAT0002174 | MIRT041978 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-28-5p | MIMAT0000085 | MIRT049991 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
