HCSGD entry for PRDM11
1. General information
| Official gene symbol | PRDM11 |
|---|---|
| Entrez ID | 56981 |
| Gene full name | PR domain containing 11 |
| Other gene symbols | PFM8 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003682 | Chromatin binding | IEA | molecular_function |
| GO:0008168 | Methyltransferase activity | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3745336347 | 0.9258083204 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0663552576 |
| GSE13712_SHEAR | Down | -0.1256696130 |
| GSE13712_STATIC | Down | -0.0035697729 |
| GSE19018 | Up | 0.0886712567 |
| GSE19899_A1 | Up | 0.0282040058 |
| GSE19899_A2 | Up | 0.0052641686 |
| PubMed_21979375_A1 | Down | -0.1531172886 |
| PubMed_21979375_A2 | Down | -0.1490292891 |
| GSE35957 | Up | 0.1556584637 |
| GSE36640 | Up | 0.0934853174 |
| GSE54402 | Down | -0.1646828601 |
| GSE9593 | Down | -0.0014835661 |
| GSE43922 | - | - |
| GSE24585 | - | - |
| GSE37065 | - | - |
| GSE28863_A1 | Up | 0.6989694326 |
| GSE28863_A2 | Up | 0.4539872256 |
| GSE28863_A3 | Up | 0.2471493059 |
| GSE28863_A4 | Up | 0.1087790226 |
| GSE48662 | Down | -0.0381694320 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018493 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
