HCSGD entry for C8orf4
1. General information
| Official gene symbol | C8orf4 |
|---|---|
| Entrez ID | 56892 |
| Gene full name | chromosome 8 open reading frame 4 |
| Other gene symbols | TC-1 TC1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0006915 | Apoptotic process | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0007506364 | 0.1316296607 | 0.0773316602 | 0.6992178204 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1716432255 |
| GSE13712_SHEAR | Down | -0.6149889694 |
| GSE13712_STATIC | Up | 0.1050796912 |
| GSE19018 | Up | 0.2895011851 |
| GSE19899_A1 | Up | 3.4049707103 |
| GSE19899_A2 | Up | 3.1991886896 |
| PubMed_21979375_A1 | Up | 5.5152291489 |
| PubMed_21979375_A2 | Up | 5.2124982389 |
| GSE35957 | Up | 1.2208047925 |
| GSE36640 | Down | -0.2840165269 |
| GSE54402 | Up | 0.7653813484 |
| GSE9593 | Down | -0.1415656394 |
| GSE43922 | Up | 1.2390368747 |
| GSE24585 | Up | 0.3098719462 |
| GSE37065 | Up | 0.1006982670 |
| GSE28863_A1 | Down | -0.4689379606 |
| GSE28863_A2 | Down | -0.9056997093 |
| GSE28863_A3 | Down | -0.2243213391 |
| GSE28863_A4 | Down | -0.6099149663 |
| GSE48662 | Up | 0.0774803188 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017893 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-128-3p | MIMAT0000424 | MIRT021971 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-98-5p | MIMAT0000096 | MIRT027641 | Microarray | Functional MTI (Weak) | 19088304 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
