HCSGD entry for TM9SF3
1. General information
| Official gene symbol | TM9SF3 |
|---|---|
| Entrez ID | 56889 |
| Gene full name | transmembrane 9 superfamily member 3 |
| Other gene symbols | EP70-P-iso SMBP |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5380289123 | 0.6723063827 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0392414739 |
| GSE13712_SHEAR | Down | -0.0948104005 |
| GSE13712_STATIC | Up | 0.0246593860 |
| GSE19018 | Down | -0.0975773020 |
| GSE19899_A1 | Down | -0.1848002422 |
| GSE19899_A2 | Down | -0.0677858905 |
| PubMed_21979375_A1 | Down | -0.1151420109 |
| PubMed_21979375_A2 | Down | -0.3053578318 |
| GSE35957 | Up | 0.3483008624 |
| GSE36640 | Up | 0.3784195096 |
| GSE54402 | Down | -0.0938475157 |
| GSE9593 | Up | 0.1893750805 |
| GSE43922 | Up | 0.2163848148 |
| GSE24585 | Up | 0.1055993952 |
| GSE37065 | Down | -0.0177797336 |
| GSE28863_A1 | Up | 0.0378363612 |
| GSE28863_A2 | Up | 0.3114059058 |
| GSE28863_A3 | Down | -0.4288055929 |
| GSE28863_A4 | Up | 0.1927282071 |
| GSE48662 | Down | -0.0994225185 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-21-5p | MIMAT0000076 | MIRT000166 | Luciferase reporter assay | Functional MTI | 19253296 |
| hsa-miR-193b-3p | MIMAT0002819 | MIRT016580 | Proteomics | Functional MTI (Weak) | 21512034 |
| hsa-miR-331-3p | MIMAT0000760 | MIRT019233 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT023025 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-181a-5p | MIMAT0000256 | MIRT025193 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT030079 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-24-3p | MIMAT0000080 | MIRT030565 | Microarray | Functional MTI (Weak) | 19748357 |
| hsa-miR-744-5p | MIMAT0004945 | MIRT037501 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-484 | MIMAT0002174 | MIRT041832 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-186-5p | MIMAT0000456 | MIRT045008 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-15b-5p | MIMAT0000417 | MIRT046388 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-30c-5p | MIMAT0000244 | MIRT047846 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-100-5p | MIMAT0000098 | MIRT048499 | CLASH | Functional MTI (Weak) | 23622248 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
