HCSGD entry for CDC42SE1
1. General information
| Official gene symbol | CDC42SE1 |
|---|---|
| Entrez ID | 56882 |
| Gene full name | CDC42 small effector 1 |
| Other gene symbols | SCIP1 SPEC1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005095 | GTPase inhibitor activity | TAS | molecular_function |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0005739 | Mitochondrion | IDA | cellular_component |
| GO:0005856 | Cytoskeleton | IEA | cellular_component |
| GO:0005886 | Plasma membrane | IEA | cellular_component |
| GO:0006909 | Phagocytosis | IEA | biological_process |
| GO:0007165 | Signal transduction | TAS | biological_process |
| GO:0008360 | Regulation of cell shape | IEA | biological_process |
| GO:0043086 | Negative regulation of catalytic activity | TAS | biological_process |
| GO:0050790 | Regulation of catalytic activity | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0313458189 | 0.7601559211 | 0.4099809312 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0117971496 |
| GSE13712_SHEAR | Down | -0.0242685296 |
| GSE13712_STATIC | Down | -0.0966845766 |
| GSE19018 | Down | -0.3422802737 |
| GSE19899_A1 | Up | 0.6792427933 |
| GSE19899_A2 | Up | 1.0712152569 |
| PubMed_21979375_A1 | Up | 0.7174126986 |
| PubMed_21979375_A2 | Up | 0.7602319358 |
| GSE35957 | Up | 0.1117088660 |
| GSE36640 | Up | 0.2532240507 |
| GSE54402 | Up | 1.1027069516 |
| GSE9593 | Down | -0.1056969443 |
| GSE43922 | Up | 0.9514903684 |
| GSE24585 | Up | 0.0197818364 |
| GSE37065 | Down | -0.0496865325 |
| GSE28863_A1 | Down | -0.0179954691 |
| GSE28863_A2 | Down | -0.0459515521 |
| GSE28863_A3 | Up | 0.1069510394 |
| GSE28863_A4 | Down | -0.3633681192 |
| GSE48662 | Down | -0.0156286110 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-29c-3p | MIMAT0000681 | MIRT020379 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-1 | MIMAT0000416 | MIRT024042 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-320a | MIMAT0000510 | MIRT044634 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049635 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
