HCSGD entry for JPH1
1. General information
| Official gene symbol | JPH1 |
|---|---|
| Entrez ID | 56704 |
| Gene full name | junctophilin 1 |
| Other gene symbols | JP-1 JP1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003674 | Molecular_function | ND | molecular_function |
| GO:0005886 | Plasma membrane | IEA | cellular_component |
| GO:0007517 | Muscle organ development | IEA | biological_process |
| GO:0008307 | Structural constituent of muscle | IEA | molecular_function |
| GO:0014701 | Junctional sarcoplasmic reticulum membrane | TAS | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0030018 | Z disc | IEA | cellular_component |
| GO:0030314 | Junctional membrane complex | NAS | cellular_component |
| GO:0060314 | Regulation of ryanodine-sensitive calcium-release channel activity | TAS | biological_process |
| GO:0060402 | Calcium ion transport into cytosol | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.4531076479 | 0.6606646974 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1118445308 |
| GSE13712_SHEAR | Up | 0.0423524904 |
| GSE13712_STATIC | Down | -0.0414283781 |
| GSE19018 | Up | 0.0398933813 |
| GSE19899_A1 | Up | 0.1523533756 |
| GSE19899_A2 | Up | 0.2117413669 |
| PubMed_21979375_A1 | Up | 0.3040809163 |
| PubMed_21979375_A2 | Up | 0.0539000089 |
| GSE35957 | Up | 0.2200384054 |
| GSE36640 | Up | 0.0521485596 |
| GSE54402 | Up | 0.2657543700 |
| GSE9593 | Down | -0.0416100114 |
| GSE43922 | Down | -0.0219949458 |
| GSE24585 | Down | -0.8759036567 |
| GSE37065 | Up | 0.1027961404 |
| GSE28863_A1 | Down | -0.1170993223 |
| GSE28863_A2 | Up | 0.0353109374 |
| GSE28863_A3 | Up | 0.2068647630 |
| GSE28863_A4 | Up | 0.0181395133 |
| GSE48662 | Down | -0.0625640413 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-7-5p | MIMAT0000252 | MIRT025712 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-21-5p | MIMAT0000076 | MIRT030841 | Microarray | Functional MTI (Weak) | 18591254 |
| hsa-miR-100-5p | MIMAT0000098 | MIRT048572 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-99a-5p | MIMAT0000097 | MIRT048673 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
