HCSGD entry for TRIM39

1. General information

Official gene symbolTRIM39
Entrez ID56658
Gene full nametripartite motif containing 39
Other gene symbolsRNF23 TFP TRIM39B
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0003674Molecular_functionNDmolecular_function
GO:0005515Protein bindingIPImolecular_function
GO:0005575Cellular_componentNDcellular_component
GO:0005622IntracellularIEAcellular_component
GO:0005739MitochondrionIEAcellular_component
GO:0005829CytosolIEAcellular_component
GO:0006915Apoptotic processIEAbiological_process
GO:0008150Biological_processNDbiological_process
GO:0008270Zinc ion bindingIEAmolecular_function
GO:0016567Protein ubiquitinationIEAbiological_process
GO:0016874Ligase activityIEAmolecular_function
GO:0042802Identical protein bindingIPImolecular_function
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.18959586260.99482384410.84725852291.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954--
GSE13712_SHEAR--
GSE13712_STATIC--
GSE19018--
GSE19899_A1--
GSE19899_A2--
PubMed_21979375_A1--
PubMed_21979375_A2--
GSE35957--
GSE36640--
GSE54402--
GSE9593--
GSE43922--
GSE24585--
GSE37065--
GSE28863_A1--
GSE28863_A2--
GSE28863_A3--
GSE28863_A4--
GSE48662Up0.1605766386

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.