HCSGD entry for CHST7
1. General information
| Official gene symbol | CHST7 |
|---|---|
| Entrez ID | 56548 |
| Gene full name | carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 7 |
| Other gene symbols | C6ST-2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | TAS | cellular_component |
| GO:0001517 | N-acetylglucosamine 6-O-sulfotransferase activity | IDA | molecular_function |
| GO:0005975 | Carbohydrate metabolic process | TAS | biological_process |
| GO:0005976 | Polysaccharide metabolic process | TAS | biological_process |
| GO:0006044 | N-acetylglucosamine metabolic process | IDA | biological_process |
| GO:0006790 | Sulfur compound metabolic process | IDA | biological_process |
| GO:0008459 | Chondroitin 6-sulfotransferase activity | IDA | molecular_function |
| GO:0016021 | Integral component of membrane | NAS TAS | cellular_component |
| GO:0030203 | Glycosaminoglycan metabolic process | TAS | biological_process |
| GO:0030204 | Chondroitin sulfate metabolic process | TAS | biological_process |
| GO:0030206 | Chondroitin sulfate biosynthetic process | IDA TAS | biological_process |
| GO:0044281 | Small molecule metabolic process | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0048444588 | 0.9027545458 | 0.1832054598 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 1.1050558017 |
| GSE13712_SHEAR | Down | -0.6227542544 |
| GSE13712_STATIC | Down | -0.4806843049 |
| GSE19018 | Up | 0.1414361894 |
| GSE19899_A1 | Down | -0.1165820561 |
| GSE19899_A2 | Up | 1.2340613664 |
| PubMed_21979375_A1 | Up | 1.3555928008 |
| PubMed_21979375_A2 | Up | 1.4466259375 |
| GSE35957 | Up | 0.3869673660 |
| GSE36640 | Up | 1.7402154182 |
| GSE54402 | Up | 0.4015901328 |
| GSE9593 | Up | 0.5059835489 |
| GSE43922 | Up | 0.1943322462 |
| GSE24585 | Up | 0.1254614150 |
| GSE37065 | Up | 0.0847360225 |
| GSE28863_A1 | Down | -0.5460616071 |
| GSE28863_A2 | Up | 0.0271154492 |
| GSE28863_A3 | Up | 0.4780665305 |
| GSE28863_A4 | Up | 0.0977635297 |
| GSE48662 | Up | 0.3139125179 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029511 | Microarray | Functional MTI (Weak) | 19088304 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
