HCSGD entry for CTNNBL1
1. General information
| Official gene symbol | CTNNBL1 |
|---|---|
| Entrez ID | 56259 |
| Gene full name | catenin, beta like 1 |
| Other gene symbols | C20orf33 NAP NYD-SP19 P14L PP8304 dJ633O20.1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000974 | Prp19 complex | IDA | cellular_component |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005681 | Spliceosomal complex | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0006397 | MRNA processing | IEA | biological_process |
| GO:0006915 | Apoptotic process | IEA | biological_process |
| GO:0008380 | RNA splicing | IEA | biological_process |
| GO:0016445 | Somatic diversification of immunoglobulins | IMP | biological_process |
| GO:0019899 | Enzyme binding | IPI | molecular_function |
| GO:0043065 | Positive regulation of apoptotic process | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0704967592 | 0.8460734813 | 0.5669249007 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0750525799 |
| GSE13712_SHEAR | Up | 0.0810085738 |
| GSE13712_STATIC | Up | 0.2105658433 |
| GSE19018 | Up | 0.0498653634 |
| GSE19899_A1 | Down | -0.0849591351 |
| GSE19899_A2 | Up | 0.5285921931 |
| PubMed_21979375_A1 | Up | 1.5210126971 |
| PubMed_21979375_A2 | Up | 0.6778670441 |
| GSE35957 | Down | -0.8693825260 |
| GSE36640 | Down | -0.6870580849 |
| GSE54402 | Up | 0.6209697642 |
| GSE9593 | Up | 0.0287419066 |
| GSE43922 | Up | 0.2890277184 |
| GSE24585 | Down | -0.0600982758 |
| GSE37065 | Up | 0.2849781687 |
| GSE28863_A1 | Up | 0.1350780440 |
| GSE28863_A2 | Up | 0.1250375694 |
| GSE28863_A3 | Down | -0.0831659931 |
| GSE28863_A4 | Up | 0.0823815406 |
| GSE48662 | Down | -0.0481040020 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-155-5p | MIMAT0000646 | MIRT020731 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-1229-3p | MIMAT0005584 | MIRT036306 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-320a | MIMAT0000510 | MIRT044639 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-149-5p | MIMAT0000450 | MIRT045603 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049224 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-25-3p | MIMAT0000081 | MIRT050320 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
