HCSGD entry for RNF17
1. General information
| Official gene symbol | RNF17 |
|---|---|
| Entrez ID | 56163 |
| Gene full name | ring finger protein 17 |
| Other gene symbols | Mmip-2 SPATA23 TDRD4 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0007275 | Multicellular organismal development | IEA | biological_process |
| GO:0007286 | Spermatid development | IEA | biological_process |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
| GO:0016788 | Hydrolase activity, acting on ester bonds | IEA | molecular_function |
| GO:0042803 | Protein homodimerization activity | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8771545800 | 0.8519426732 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0947168550 |
| GSE13712_SHEAR | Up | 0.0116271547 |
| GSE13712_STATIC | Down | -0.0163939314 |
| GSE19018 | Up | 0.0425558032 |
| GSE19899_A1 | Up | 0.1208811021 |
| GSE19899_A2 | Up | 0.0882955291 |
| PubMed_21979375_A1 | Up | 0.1189322562 |
| PubMed_21979375_A2 | Down | -0.0168866697 |
| GSE35957 | Up | 0.1096461092 |
| GSE36640 | Up | 0.0054673044 |
| GSE54402 | Up | 0.0488164404 |
| GSE9593 | Down | -0.0119353138 |
| GSE43922 | Up | 0.0173583427 |
| GSE24585 | Down | -0.0102079856 |
| GSE37065 | Down | -0.0234412631 |
| GSE28863_A1 | Down | -0.0561793176 |
| GSE28863_A2 | Down | -0.0093606957 |
| GSE28863_A3 | Up | 0.0986020669 |
| GSE28863_A4 | Down | -0.0654099913 |
| GSE48662 | Down | -0.0180021352 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
