HCSGD entry for PCDHA2

1. General information

Official gene symbolPCDHA2
Entrez ID56146
Gene full nameprotocadherin alpha 2
Other gene symbolsPCDH-ALPHA2
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005509Calcium ion bindingIEAmolecular_function
GO:0005887Integral component of plasma membraneTAScellular_component
GO:0007155Cell adhesionTASbiological_process
GO:0007156Homophilic cell adhesionIEAbiological_process
GO:0007399Nervous system developmentTASbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.32397793020.93998182060.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.1807786457
GSE13712_SHEARUp0.1029700958
GSE13712_STATICUp0.0477624230
GSE19018Up0.1958978183
GSE19899_A1Up0.0989406076
GSE19899_A2Down-0.0062280347
PubMed_21979375_A1Up0.0030030148
PubMed_21979375_A2Up0.0051721827
GSE35957Up0.5731777016
GSE36640Up0.0245817910
GSE54402Down-0.1955230031
GSE9593Up0.0978549985
GSE43922Down-0.0009461438
GSE24585Up0.3536154965
GSE37065Down-0.0926453174
GSE28863_A1--
GSE28863_A2--
GSE28863_A3--
GSE28863_A4--
GSE48662Up0.0742134066

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-320cMIMAT0005793MIRT036156CLASHFunctional MTI (Weak)23622248
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.