HCSGD entry for PCDHA5

1. General information

Official gene symbolPCDHA5
Entrez ID56143
Gene full nameprotocadherin alpha 5
Other gene symbolsCNR6 CNRN6 CNRS6 CRNR6 PCDH-ALPHA5
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005509Calcium ion bindingIEAmolecular_function
GO:0005887Integral component of plasma membraneTAScellular_component
GO:0007155Cell adhesionTASbiological_process
GO:0007156Homophilic cell adhesionIEAbiological_process
GO:0007399Nervous system developmentTASbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.29389945290.82122572850.99399054471.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0308265763
GSE13712_SHEARUp0.0617917982
GSE13712_STATICUp0.2361982526
GSE19018Up0.0137959498
GSE19899_A1Up0.1185362847
GSE19899_A2Down-0.0451387447
PubMed_21979375_A1Up0.2980513287
PubMed_21979375_A2Up0.1291899412
GSE35957Up0.1606887811
GSE36640Up0.0388614287
GSE54402Up0.0305638973
GSE9593Down-0.2024858523
GSE43922Down-0.0298793929
GSE24585Up0.5680209792
GSE37065Down-0.0506697224
GSE28863_A1--
GSE28863_A2--
GSE28863_A3--
GSE28863_A4--
GSE48662Down-0.1328127423

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.