HCSGD entry for PCDHA6

1. General information

Official gene symbolPCDHA6
Entrez ID56142
Gene full nameprotocadherin alpha 6
Other gene symbolsCNR2 CNRN2 CNRS2 CRNR2 PCDH-ALPHA6
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005509Calcium ion bindingIEAmolecular_function
GO:0005576Extracellular regionIEAcellular_component
GO:0005887Integral component of plasma membraneTAScellular_component
GO:0007155Cell adhesionTASbiological_process
GO:0007156Homophilic cell adhesionIEAbiological_process
GO:0007399Nervous system developmentTASbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.11485521070.88551892410.69656774191.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954--
GSE13712_SHEAR--
GSE13712_STATIC--
GSE19018--
GSE19899_A1--
GSE19899_A2--
PubMed_21979375_A1--
PubMed_21979375_A2--
GSE35957--
GSE36640--
GSE54402--
GSE9593--
GSE43922Up0.0253357471
GSE24585Up0.8136397698
GSE37065Up0.0044195545
GSE28863_A1Down-0.6608456399
GSE28863_A2Up0.3690616850
GSE28863_A3Up0.6814707358
GSE28863_A4Up0.0810150414
GSE48662Up0.0562705473

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-26b-5pMIMAT0000083MIRT028979MicroarrayFunctional MTI (Weak)19088304
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.