HCSGD entry for PCDHAC1

1. General information

Official gene symbolPCDHAC1
Entrez ID56135
Gene full nameprotocadherin alpha subfamily C, 1
Other gene symbolsPCDH-ALPHA-C1
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005509Calcium ion bindingIEAmolecular_function
GO:0005887Integral component of plasma membraneTAScellular_component
GO:0007155Cell adhesionTASbiological_process
GO:0007156Homophilic cell adhesionIEAbiological_process
GO:0007399Nervous system developmentTASbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.51562200140.95377635350.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.1158143598
GSE13712_SHEARDown-0.1027499896
GSE13712_STATICUp0.1492998230
GSE19018Up0.2384475348
GSE19899_A1Down-0.0101649271
GSE19899_A2Up0.1917832910
PubMed_21979375_A1Up0.0485296732
PubMed_21979375_A2Down-0.0049324880
GSE35957Down-0.0404468864
GSE36640Up0.2819101398
GSE54402Up0.0706164329
GSE9593Up0.0804499067
GSE43922--
GSE24585--
GSE37065--
GSE28863_A1--
GSE28863_A2--
GSE28863_A3--
GSE28863_A4--
GSE48662Up0.0894664253

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.