HCSGD entry for PCDHB3
1. General information
| Official gene symbol | PCDHB3 |
|---|---|
| Entrez ID | 56132 |
| Gene full name | protocadherin beta 3 |
| Other gene symbols | PCDH-BETA3 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005509 | Calcium ion binding | IEA | molecular_function |
| GO:0005887 | Integral component of plasma membrane | TAS | cellular_component |
| GO:0007155 | Cell adhesion | TAS | biological_process |
| GO:0007156 | Homophilic cell adhesion | IEA | biological_process |
| GO:0007268 | Synaptic transmission | TAS | biological_process |
| GO:0007399 | Nervous system development | TAS | biological_process |
| GO:0007416 | Synapse assembly | TAS | biological_process |
| GO:0016021 | Integral component of membrane | NAS | cellular_component |
| GO:0016339 | Calcium-dependent cell-cell adhesion | NAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0286635462 | 0.1472715436 | 0.3927398230 | 0.7417402028 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0569748738 |
| GSE13712_SHEAR | Down | -0.3616664714 |
| GSE13712_STATIC | Down | -0.1180285933 |
| GSE19018 | Down | -0.2576185377 |
| GSE19899_A1 | Down | -0.1185381448 |
| GSE19899_A2 | Down | -0.3298290631 |
| PubMed_21979375_A1 | Down | -0.3873113243 |
| PubMed_21979375_A2 | Down | -0.2587404396 |
| GSE35957 | Up | 0.1022479895 |
| GSE36640 | Up | 0.4570939280 |
| GSE54402 | Down | -0.1812097530 |
| GSE9593 | Down | -0.0860259993 |
| GSE43922 | Down | -0.4513233096 |
| GSE24585 | Up | 1.0475484166 |
| GSE37065 | Up | 0.2274599023 |
| GSE28863_A1 | Up | 2.9977382728 |
| GSE28863_A2 | Up | 1.3040682734 |
| GSE28863_A3 | Up | 0.2623005098 |
| GSE28863_A4 | Down | -0.4016843060 |
| GSE48662 | - | - |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
