HCSGD entry for PCDHB9

1. General information

Official gene symbolPCDHB9
Entrez ID56127
Gene full nameprotocadherin beta 9
Other gene symbolsPCDH-BETA9 PCDH3H
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005509Calcium ion bindingIEAmolecular_function
GO:0005886Plasma membraneIEAcellular_component
GO:0007156Homophilic cell adhesionIEAbiological_process
GO:0007268Synaptic transmissionTASbiological_process
GO:0007416Synapse assemblyTASbiological_process
GO:0016021Integral component of membraneNAScellular_component
GO:0016339Calcium-dependent cell-cell adhesionNASbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.03062167470.58709953270.40462433521.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0189024299
GSE13712_SHEARDown-0.0638823279
GSE13712_STATICUp0.0111954821
GSE19018Up0.0600166674
GSE19899_A1Down-0.1143957847
GSE19899_A2Down0.0000000000
PubMed_21979375_A1Down-0.3747481092
PubMed_21979375_A2Down-0.2687204089
GSE35957Up0.6283356135
GSE36640Up3.4401455682
GSE54402Down-0.1143792299
GSE9593Up0.0456774257
GSE43922Down-1.1595345591
GSE24585Up1.3412267387
GSE37065Up0.2487835741
GSE28863_A1--
GSE28863_A2--
GSE28863_A3--
GSE28863_A4--
GSE48662Up0.8483007969

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.