HCSGD entry for PCDHB12

1. General information

Official gene symbolPCDHB12
Entrez ID56124
Gene full nameprotocadherin beta 12
Other gene symbolsPCDH-BETA12
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005509Calcium ion bindingIEAmolecular_function
GO:0005886Plasma membraneIEAcellular_component
GO:0005887Integral component of plasma membraneTAScellular_component
GO:0007155Cell adhesionTASbiological_process
GO:0007156Homophilic cell adhesionIEAbiological_process
GO:0007399Nervous system developmentTASbiological_process
GO:0016021Integral component of membraneIEAcellular_component
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.13756372860.34199976060.74732833261.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.1425517969
GSE13712_SHEARDown-0.3289836389
GSE13712_STATICUp0.0338783135
GSE19018Up0.0960088246
GSE19899_A1Down-0.2358821757
GSE19899_A2Down-0.6875187055
PubMed_21979375_A1Down-0.4632512762
PubMed_21979375_A2Down-0.4467413908
GSE35957Up0.1551901912
GSE36640Up0.1197349218
GSE54402Down-0.1395671884
GSE9593Up0.2004371979
GSE43922Down-0.1448366335
GSE24585Up1.4206233200
GSE37065Up0.2046122883
GSE28863_A1Up0.9350052307
GSE28863_A2Up0.8621878278
GSE28863_A3Up0.0839380690
GSE28863_A4Down-0.0741456901
GSE48662Up0.1145073866

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.