HCSGD entry for PCDHB13

1. General information

Official gene symbolPCDHB13
Entrez ID56123
Gene full nameprotocadherin beta 13
Other gene symbolsPCDH-BETA13
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005509Calcium ion bindingIEAmolecular_function
GO:0005886Plasma membraneIEAcellular_component
GO:0007156Homophilic cell adhesionIEAbiological_process
GO:0007268Synaptic transmissionTASbiological_process
GO:0007416Synapse assemblyTASbiological_process
GO:0016021Integral component of membraneNAScellular_component
GO:0016339Calcium-dependent cell-cell adhesionNASbiological_process
Entries Per Page
Displaying Page of

4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.04121810720.36240321420.45460448071.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0218217968
GSE13712_SHEARDown-0.1885632656
GSE13712_STATICUp0.0291276689
GSE19018Up0.1627283365
GSE19899_A1Down-0.0827980527
GSE19899_A2Down-0.5158058632
PubMed_21979375_A1Down-0.0226336005
PubMed_21979375_A2Down-0.3147528569
GSE35957Up0.1511329888
GSE36640Up1.6759414546
GSE54402Down-0.3739376975
GSE9593Up0.0525615449
GSE43922Down-0.6336479039
GSE24585Up2.0300905535
GSE37065Up0.4449387577
GSE28863_A1Up0.3047070901
GSE28863_A2Up1.3200463032
GSE28863_A3Down-0.0675944372
GSE28863_A4Down-0.1052172446
GSE48662Up0.1869329467

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.