HCSGD entry for PCDHB15
1. General information
| Official gene symbol | PCDHB15 |
|---|---|
| Entrez ID | 56121 |
| Gene full name | protocadherin beta 15 |
| Other gene symbols | PCDH-BETA15 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005509 | Calcium ion binding | IEA | molecular_function |
| GO:0005887 | Integral component of plasma membrane | TAS | cellular_component |
| GO:0007155 | Cell adhesion | TAS | biological_process |
| GO:0007156 | Homophilic cell adhesion | IEA | biological_process |
| GO:0007399 | Nervous system development | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1825330573 | 0.0610088674 | 0.8364469892 | 0.4652813441 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1214313936 |
| GSE13712_SHEAR | Down | -0.0808265145 |
| GSE13712_STATIC | Up | 0.2373807755 |
| GSE19018 | Down | -0.0052264182 |
| GSE19899_A1 | Down | -0.0088026457 |
| GSE19899_A2 | Down | -1.4236097393 |
| PubMed_21979375_A1 | Down | -0.3306837621 |
| PubMed_21979375_A2 | Down | -0.6294255853 |
| GSE35957 | Up | 0.0848139723 |
| GSE36640 | Up | 0.8102855782 |
| GSE54402 | Down | -0.4814513949 |
| GSE9593 | Down | -0.0528239010 |
| GSE43922 | Down | -0.7242368233 |
| GSE24585 | Up | 1.5167363800 |
| GSE37065 | Up | 0.2406181834 |
| GSE28863_A1 | Up | 0.8982473573 |
| GSE28863_A2 | Down | -0.5662691802 |
| GSE28863_A3 | Down | -0.1428526109 |
| GSE28863_A4 | Down | -0.2664139212 |
| GSE48662 | Down | -0.0286338443 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017666 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
