HCSGD entry for PCDHGA10
1. General information
| Official gene symbol | PCDHGA10 |
|---|---|
| Entrez ID | 56106 |
| Gene full name | protocadherin gamma subfamily A, 10 |
| Other gene symbols | PCDH-GAMMA-A10 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005509 | Calcium ion binding | IEA | molecular_function |
| GO:0005886 | Plasma membrane | IEA | cellular_component |
| GO:0007156 | Homophilic cell adhesion | IEA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9622981232 | 0.2350099046 | 0.9999902473 | 0.9330286748 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0153677806 |
| GSE13712_SHEAR | Down | -0.3266800797 |
| GSE13712_STATIC | Down | -0.4916342155 |
| GSE19018 | Up | 0.1204079341 |
| GSE19899_A1 | Up | 0.1033084328 |
| GSE19899_A2 | Down | -0.1152998909 |
| PubMed_21979375_A1 | Down | -0.3276026918 |
| PubMed_21979375_A2 | Down | -0.1603484277 |
| GSE35957 | Up | 0.2840638434 |
| GSE36640 | Down | -0.3169399307 |
| GSE54402 | Down | -0.2934290093 |
| GSE9593 | Up | 0.0883081310 |
| GSE43922 | - | - |
| GSE24585 | - | - |
| GSE37065 | - | - |
| GSE28863_A1 | - | - |
| GSE28863_A2 | - | - |
| GSE28863_A3 | - | - |
| GSE28863_A4 | - | - |
| GSE48662 | - | - |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017681 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-142-3p | MIMAT0000434 | MIRT021580 | Microarray | Functional MTI (Weak) | 17612493 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
