HCSGD entry for PCDHGB5

1. General information

Official gene symbolPCDHGB5
Entrez ID56101
Gene full nameprotocadherin gamma subfamily B, 5
Other gene symbolsPCDH-GAMMA-B5
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005509Calcium ion bindingIEAmolecular_function
GO:0005886Plasma membraneIEAcellular_component
GO:0007156Homophilic cell adhesionIEAbiological_process
GO:0016021Integral component of membraneIEAcellular_component
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.34658321870.84867949550.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0624156934
GSE13712_SHEARUp0.5023237926
GSE13712_STATICUp0.3549526879
GSE19018Up0.5020578436
GSE19899_A1Down-0.0374119328
GSE19899_A2Up0.1454666123
PubMed_21979375_A1Up0.0549108201
PubMed_21979375_A2Down-0.2151413513
GSE35957Up0.3406610160
GSE36640Down-0.5559424238
GSE54402Down-0.1103307543
GSE9593Up0.1537406603
GSE43922--
GSE24585--
GSE37065--
GSE28863_A1--
GSE28863_A2--
GSE28863_A3--
GSE28863_A4--
GSE48662--

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase
No target information from mirTarBase
  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.