HCSGD entry for PCDHGC4

1. General information

Official gene symbolPCDHGC4
Entrez ID56098
Gene full nameprotocadherin gamma subfamily C, 4
Other gene symbolsPCDH-GAMMA-C4
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in Literature mining network.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005509Calcium ion bindingIEAmolecular_function
GO:0005886Plasma membraneIEAcellular_component
GO:0007156Homophilic cell adhesionIEAbiological_process
GO:0016021Integral component of membraneIEAcellular_component
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.76017618250.87508956730.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0726215134
GSE13712_SHEARUp0.1279746118
GSE13712_STATICDown-0.0223669905
GSE19018Down-0.0442038134
GSE19899_A1Up0.0753264002
GSE19899_A2Down-0.0501419216
PubMed_21979375_A1Down-0.0907174797
PubMed_21979375_A2Up0.0135973548
GSE35957Up0.0752636096
GSE36640Up0.0239324385
GSE54402Down-0.0222158536
GSE9593Down-0.1841861576
GSE43922--
GSE24585--
GSE37065--
GSE28863_A1--
GSE28863_A2--
GSE28863_A3--
GSE28863_A4--
GSE48662Up0.5274384240

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

  • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-335-5pMIMAT0000765MIRT016713MicroarrayFunctional MTI (Weak)18185580
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  • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.