HCSGD entry for BARX1
1. General information
| Official gene symbol | BARX1 |
|---|---|
| Entrez ID | 56033 |
| Gene full name | BARX homeobox 1 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000976 | Transcription regulatory region sequence-specific DNA binding | IEA | molecular_function |
| GO:0003700 | Sequence-specific DNA binding transcription factor activity | NAS | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0007267 | Cell-cell signaling | IEA | biological_process |
| GO:0009952 | Anterior/posterior pattern specification | IEA | biological_process |
| GO:0030178 | Negative regulation of Wnt signaling pathway | IEA | biological_process |
| GO:0030855 | Epithelial cell differentiation | IEA | biological_process |
| GO:0048536 | Spleen development | IEA | biological_process |
| GO:0055123 | Digestive system development | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2906876372 | 0.3899633791 | 0.9898045666 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2903318456 |
| GSE13712_SHEAR | Down | -0.0647541585 |
| GSE13712_STATIC | Down | -0.0202245588 |
| GSE19018 | Up | 0.4076573635 |
| GSE19899_A1 | Up | 0.0589911876 |
| GSE19899_A2 | Up | 0.0620078752 |
| PubMed_21979375_A1 | Down | -0.1675590402 |
| PubMed_21979375_A2 | Down | -0.1022971076 |
| GSE35957 | Down | -0.9175918618 |
| GSE36640 | Down | -0.0053743252 |
| GSE54402 | Up | 0.2162081251 |
| GSE9593 | Down | -0.0112476018 |
| GSE43922 | Up | 0.1318567008 |
| GSE24585 | Up | 0.2019341907 |
| GSE37065 | Down | -0.2563660842 |
| GSE28863_A1 | Down | -0.1230570685 |
| GSE28863_A2 | Up | 0.0097843878 |
| GSE28863_A3 | Up | 0.4266359246 |
| GSE28863_A4 | Up | 0.1385419250 |
| GSE48662 | Down | -0.0293981210 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT022812 | Microarray | Functional MTI (Weak) | 18668037 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
