HCSGD entry for NXF3
1. General information
| Official gene symbol | NXF3 |
|---|---|
| Entrez ID | 56000 |
| Gene full name | nuclear RNA export factor 3 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in Literature mining network.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000166 | Nucleotide binding | IEA | molecular_function |
| GO:0003723 | RNA binding | IEA | molecular_function |
| GO:0003729 | MRNA binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005622 | Intracellular | IEA | cellular_component |
| GO:0005634 | Nucleus | IDA IEA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0006406 | MRNA export from nucleus | IDA IEA | biological_process |
| GO:0006810 | Transport | IEA | biological_process |
| GO:0016973 | Poly(A)+ mRNA export from nucleus | IEA | biological_process |
| GO:0042272 | Nuclear RNA export factor complex | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6907866798 | 0.8184142852 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0418284585 |
| GSE13712_SHEAR | Down | -0.2125207730 |
| GSE13712_STATIC | Up | 0.0989937954 |
| GSE19018 | Up | 0.0462868092 |
| GSE19899_A1 | Up | 0.1149271908 |
| GSE19899_A2 | Up | 0.1751883776 |
| PubMed_21979375_A1 | Up | 0.0188196264 |
| PubMed_21979375_A2 | Up | 0.0190514602 |
| GSE35957 | Down | -0.0405208343 |
| GSE36640 | Up | 0.1619270514 |
| GSE54402 | Up | 0.0258444044 |
| GSE9593 | Up | 0.0133019565 |
| GSE43922 | Up | 0.0122857641 |
| GSE24585 | Up | 0.0260666230 |
| GSE37065 | Up | 0.0733396744 |
| GSE28863_A1 | Down | -0.0949472937 |
| GSE28863_A2 | Down | -0.1663025914 |
| GSE28863_A3 | Up | 0.1738664998 |
| GSE28863_A4 | Up | 0.0810903532 |
| GSE48662 | Up | 0.0132530369 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017649 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
